GCC BOSC 2018 has ended
The 2018 Galaxy Community Conference (GCC2018) and Bioinformatics Open Source Conference 2018 (BOSC2018) are meeting together in Portland, Oregon, United States, June 25-30, 2018.  There will be two days of training, a two+ day meeting, and four days of intense collaboration.  The meeting features joint & parallel sessions, shared keynotes, poster & demo sessions, birds-of-a-feather, and social events.  GCCBOSC is organized by Oregon Health & Science University and will be at Reed College.

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Tuesday, June 26 • 9:00am - 11:30am
Data Carpentry Genomics Workshop: Data Organization and Automation with Shell I

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Key:  BB | XB |  -  |  -  | GG | CL

This is the first session of a 3 session series.

The goal of this one-day, three-part tutorial is to teach participants the fundamental data management and analysis skills and needed to conduct genomics research including: best practices for organization of bioinformatics projects and data as well as use of command line utilities for managing large volumes of genomic data. This tutorial is derived from the Data Carpentry Genomics Workshop, focused on the organization and intro to command line lessons. The tutorial uses active learning and hands-on practice to teach participants the skills and perspectives needed to work effectively with genomic data. Data Carpentry’s aim is to teach researchers basic concepts, skills, and tools for working with data so that they can get more done in less time, and with less pain.
The tutorial assumes no prior experience with the tools covered. However, learners are expected to have some familiarity with biological concepts, including nucleotide abbreviations. Participants should bring their laptops and plan to participate actively.

avatar for Tracy K. Teal

Tracy K. Teal

Executive Director, The Carpentries
Dr. Teal is the Executive Director of The Carpentries and a co-founder of Data Carpentry. After completing her PhD in Computation and Neural Systems at California Institute of Technology, her work as an NSF Postdoctoral Fellow focused on bioinformatics approaches to metagenomics and microbial community analysis. Then as an Assistant Professor of Microbiology and Molecular... Read More →

Tuesday June 26, 2018 9:00am - 11:30am PDT
PAB 131 Performing Arts Building, Reed Campus