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GCC BOSC 2018
The
2018 Galaxy Community Conference (GCC2018)
and
Bioinformatics Open Source Conference 2018 (BOSC2018)
are meeting together in
Portland, Oregon
, United States, June 25-30, 2018. There will be
two days of training
, a
two+ day meeting
, and
four days of intense collaboration
. The meeting features
joint & parallel sessions
,
shared keynotes
,
poster & demo
sessions,
birds-of-a-feather
, and social events. GCCBOSC is organized by
Oregon Health & Science University
and will be at
Reed College
.
Videos:
BOSC
,
GCC
; and
Program PDF
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,
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and
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Radhika Khetani
Harvard Chan Bioinformatics Core
Lead Bioinformatics Trainer & Consultant
bioinformatics.sph.harvard.edu
Wednesday
, June 27
10:50am PDT
BOSC: Session 2: Translational & Medical Informatics
Vollum Lecture Hall
Hilmar Lapp
10:51am PDT
Cloud-based data ingest for the Human Cell Atlas
Vollum Lecture Hall
Daniel Vaughan
11:05am PDT
The Human Cell Atlas Data Coordination Platform: an open source, cloud-based system for ingesting, storing, analyzing, discovering, and exploring single-cell data
Vollum Lecture Hall
Brian O'Connor
11:20am PDT
Open Humans - connecting, sharing and analyzing personal data that enables community-driven research
Vollum Lecture Hall
Bastian Greshake Tzovaras
11:40am PDT
Enabling Machine Learning at Scale with “Tiled” Human Genomes
Vollum Lecture Hall
Sarah Wait Zaranek
11:45am PDT
JASS: a free and open source software for the joint analysis and interactive analysis of GWAS results
Vollum Lecture Hall
Hervé Ménager
11:50am PDT
Building a community menagerie of automated variant validations
Vollum Lecture Hall
Brad Chapman
11:55am PDT
Variant Transforms: Loading VCF files into BigQuery for large scale data analysis
Vollum Lecture Hall
Asha Rostamianfar
12:02pm PDT
Aurora Galaxy Tools: Using R Markdown as a framework to build interactive Galaxy tool output reports
Eliot Chapel
Ming Chen
12:30pm PDT
BoF: JBrowse
PAB 104
Rob Buels
1:41pm PDT
miRTop: An open source community project for the development of a unified format file for miRNA data
Vollum Lecture Hall
Lorena Pantano Rubino
2:00pm PDT
Reproducible big data science: A case study in continuous FAIRness
Vollum Lecture Hall
Ravi K. Madduri
2:20pm PDT
InterMine 2.0: More than fifteen years of open biological data integration
Vollum Lecture Hall
Yo Yehudi
2:45pm PDT
NIH Data Commons Pilot Phase leverages the cloud to access, analyze, and share FAIR biomedical data
Vollum Lecture Hall
David Siedzik
2:50pm PDT
Reproducible data analysis with Snakemake
Vollum Lecture Hall
Johannes Köster
4:01pm PDT
Improving the Bioinformatics Curriculum
Vollum Lecture Hall
Jason Williams
5:40pm PDT
BoF: Educating Funders/PIs on Open Science
TBA
Tracy K. Teal • Jason Williams
6:00pm PDT
BOSC & GCC Social Mixer | by Lifebit
Woodstock Neighborhood
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GCC BOSC 2018
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Southeast Reed College Place, Portland, Oregon, United States
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Reed College Campus
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